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A novel gene is transcribed in the chicken α-globin gene domain in the direction opposite to the globin genes

  • N. Sjakste
  • , O. V. Iarovaia
  • , S. V. Razin
  • , G. Linares-Cruz
  • , T. Sjakste
  • , V. Le Gac
  • , Z. Zhao
  • , K. Scherrer*
  • *Corresponding author for this work
  • Institut Jacques Monod
  • Institute of Gene Biology, Russian Academy of Sciences
  • Université Paris Cité

Research output: Contribution to journalArticlepeer-review

32 Citations (Scopus)

Abstract

A novel gene transcribed in the direction opposite to that of the globin genes was found in the chicken α-globin gene domain. Northern hybridisation with single-stranded riboprobes revealed that a 4.5-kb poly(A)+ RNA is transcribed in antisense polarity with respect to the globin genes. The transcription unit encoding this RNA seems to overlap the entire cluster of alpha-globin genes and extends at least 15 kb upstream from π, the first of the α-globin genes. This new transcript shows partial sequence homology with that encoded by the human ″-14″ gene. An oligonucleotide based on part of a restriction fragment of chicken DNA that is 80 homologous to exon 4 of the human ″-14″ gene hybridises with a 4.5-kb RNA molecule. In situ hybridisation of globin-antisense probes, that detect polyribosomal mRNAs of 1.7 and 2.5 kb on Northern blots, shows these ″antisense″ transcripts to be present in the cytoplasm. The 4.5-kb RNA is absent in polyribosomal poly(A)+ RNA and may, hence, represent a nuclear pre-mRNA transcribed from the chicken gene that is homologous to the human ″-14″ gene. The expression of this gene is not specific to erythroid cells; analogous transcripts were also detected in poly(A)+ RNA extracted from a chicken lymphoblastoma cell line (HP50). Taken together, these data allow us to postulate the existence in the chicken genome of a novel gene, for which we suggest the name ″ggPRX″ in analogy to the murine mProxl, a gene identified in the upstream region of the α-globin gene domain in mice.

Original languageEnglish
Pages (from-to)1012-1021
Number of pages10
JournalMolecular and General Genetics
Volume262
Issue number6
DOIs
Publication statusPublished - 2000

Keywords

  • -14 gene
  • Chicken alpha-globin gene domain
  • ggPRX gene
  • In situ hybridisation
  • Northern analysis
  • Pre-mRNA

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